2023-W12: Data Standardization and Reuse through Public Repositories

Presenters:
▪ Claire O'Donovan, EMBL-EBI - MetaboLights
▪ Masanori Arita, NIG - MetaboBank
▪ Shankar Subramaniam, USCD – Metabolomics Workbench

Description:
The importance of data reuse cannot be over-emphasized since the beginning of the digital age. A recent game changer in the field of metabolomics is that the major journals and funders now mandate data submission to publicly traceable repositories which has led to an exponential growth in public data. This has highlighted the need for repositories and the wider community to reinvigorate standards and collaborations. In this workshop we, the providers of the major public metabolomics repositories, will present the current state of the art guidelines for experimental design including protocols, metadata, and result description. A data management plan (DMP) should be an integral part of any experimental design and we will present strategies towards metabolomics data management. After introducing our public repositories and their function in the research community, we will also discuss the ways to create synergy among researchers and other resources through data reuse and standardization.

Workshop Objectives:
▪ To present the current state of the art of metabolomics study submission and curation
▪ To gather feedback and requirements from our user communities
▪ To enable the repositories to establish a collaborative plan for the future

Learning Outcomes:
▪ To understand the current state of the art of metabolomics study submission
▪ To engage with repository staff and contribute to the future development of those resources for their benefit

Видео 2023-W12: Data Standardization and Reuse through Public Repositories канала Metabolomics Society