Realignment and framewise displacement | SPM | MATLAB | Resting-state fMRI data | AFNI
This video talks about Realignment and motion correction in resting-state fMRI data.
I sincerely thank Rakibul Hafeez for teaching me these steps and giving me the scripts.
Chapters
0:00 Introduction
0:51 Dataset
02:18 AFNI display dataset
05:12 SPM 12 Realignment
13:00 Realignment Results
20:32 Framewise Displacement
33.32 Threshold to Exclude the Subjects
UCLA Open Neuro dataset
https://openneuro.org/datasets/ds000030/versions/00016
Further reading
Motion Correction
Section 3.2.1 Motion correction of "Introduction to Resting State FMRI Functional Connectivity" by Janine Bijsterbosch, Stephen M. Smith, Christian F. Beckmann
Framewise displacement
Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion.
Section 3.7 Volume censoring of "Introduction to Resting State FMRI Functional Connectivity" by Janine Bijsterbosch, Stephen M. Smith, Christian F. Beckmann
Online link
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3254728/
About me
https://sites.google.com/view/pratik-jain/home?authuser=0
Connect with me
https://www.instagram.com/pratik.p.jain/
Видео Realignment and framewise displacement | SPM | MATLAB | Resting-state fMRI data | AFNI канала Pratik Jain
I sincerely thank Rakibul Hafeez for teaching me these steps and giving me the scripts.
Chapters
0:00 Introduction
0:51 Dataset
02:18 AFNI display dataset
05:12 SPM 12 Realignment
13:00 Realignment Results
20:32 Framewise Displacement
33.32 Threshold to Exclude the Subjects
UCLA Open Neuro dataset
https://openneuro.org/datasets/ds000030/versions/00016
Further reading
Motion Correction
Section 3.2.1 Motion correction of "Introduction to Resting State FMRI Functional Connectivity" by Janine Bijsterbosch, Stephen M. Smith, Christian F. Beckmann
Framewise displacement
Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion.
Section 3.7 Volume censoring of "Introduction to Resting State FMRI Functional Connectivity" by Janine Bijsterbosch, Stephen M. Smith, Christian F. Beckmann
Online link
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3254728/
About me
https://sites.google.com/view/pratik-jain/home?authuser=0
Connect with me
https://www.instagram.com/pratik.p.jain/
Видео Realignment and framewise displacement | SPM | MATLAB | Resting-state fMRI data | AFNI канала Pratik Jain
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