TASSEL Workshop Part 1: overview, resources, data conversion, and imputation

The University of Minnesota Plant Breeding Center hosts a workshop of the software package TASSEL (Trait Analysis by aSSociation, Evolution and Linkage) from the Buckler Lab at Cornell University. Overview of TASSEL functions including file format conversion, genotype imputation (Part 1) and LD, PCA, Kinship, and GWAS (Part 2).
Part 2: https://youtu.be/hiReCEINEVs

Install TASSEL: https://www.maizegenetics.net/tassel
Presentation slides and sample data used during the workshop: https://github.com/SushanRu/TASSEL-workshop

2:03 What can TASSEL do?
6:38 Installation and Resources
10:47 File conversion
40:53 Data Imputation
1:07:17 TASSEL in the terminal/command line

Instructors:
Dr. Sushan Ru, email: sru@umn.edu
Dr. Prabin Bajgain, email: bajga002@umn.edu

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Видео TASSEL Workshop Part 1: overview, resources, data conversion, and imputation канала University of Minnesota Plant Breeding Center